I am self-learning about whole cell modeling, specifically An introduction to whole-cell modeling and Fundamentals of Systems Biology: From Synthetic Circuits to Whole-cell Models. While my background is decades of programming, for cellular biology it is only skimming through a few books. While I can ask the authors and research groups questions directly I would prefer to only ask them specific questions and get answers to more general topic questions related to whole cell modeling elsewhere; e.g. if I ask about BioNetGen that would general, but asking how to tie BioNetGen in with other software and methodologies specific to the groups would be to specific for here.
So are there people at this site who can answer questions about whole cell modeling in general?